5MNL
Cationic trypsin in complex with benzylamine (deuterated sample at 295 K)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 295 |
Detector technology | PIXEL |
Collection date | 2015-06-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.7749 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.315, 56.941, 66.710 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 17.473 - 1.039 |
R-factor | 0.0935 |
Rwork | 0.093 |
R-free | 0.10500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4i8h |
RMSD bond length | 0.009 |
RMSD bond angle | 1.109 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1-2155)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.120 | 1.100 |
High resolution limit [Å] | 1.039 | 1.039 |
Rmerge | 0.032 | 0.533 |
Number of reflections | 94696 | |
<I/σ(I)> | 32.08 | 4.19 |
Completeness [%] | 94.6 | 92.9 |
Redundancy | 9.238 | 9.181 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.2 M ammonium sulfate, 0.1 M Hepes pH 7.5, 16-16.5% (w/v) PEG 8000 |