Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5MNE

Cationic trypsin in its apo form (deuterated sample at 100 K)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2015-06-10
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.7069
Spacegroup nameP 21 21 21
Unit cell lengths54.669, 58.290, 66.861
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution24.748 - 1.008
R-factor0.1068
Rwork0.106
R-free0.12480
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4i8h
RMSD bond length0.009
RMSD bond angle1.156
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.3221.010
High resolution limit [Å]1.0081.008
Rmerge0.0330.565
Number of reflections110736
<I/σ(I)>26.343.3
Completeness [%]97.894.9
Redundancy6.6076.649
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52900.2 M ammonium sulfate, 0.1 M Hepes pH 7.5, 18-20% (w/v) PEG 8000

229681

PDB entries from 2025-01-08

PDB statisticsPDBj update infoContact PDBjnumon