5MKR
HSP72-NBD bound to compound TCI 8 - Tyr15 in up-conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-X |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-27 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 1.5419 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.677, 86.400, 100.232 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.980 - 1.870 |
R-factor | 0.167 |
Rwork | 0.165 |
R-free | 0.22200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | In-house |
RMSD bond length | 0.010 |
RMSD bond angle | 1.010 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 86.400 | 1.970 |
High resolution limit [Å] | 1.870 | 1.870 |
Rpim | 0.018 | 0.163 |
Number of reflections | 35583 | |
<I/σ(I)> | 37.1 | 4.8 |
Completeness [%] | 95.2 | 69.4 |
Redundancy | 8.9 | 2.9 |
CC(1/2) | 0.999 | 0.934 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.1 | 291 | 16% w/v PEG-3350, 0.06 M citric acid, 0.04 M BIS-TRIS propane. Inhibitor was pre-incubated with protein prior to co-crystallisation. |