5MB4
Crystal Structure of the Psathyrella asperospora lectin PAL in complex with GlcNAc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-10-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | H 3 2 |
Unit cell lengths | 120.550, 120.550, 198.950 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.910 - 2.000 |
R-factor | 0.17168 |
Rwork | 0.169 |
R-free | 0.21449 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2bwr |
RMSD bond length | 0.015 |
RMSD bond angle | 1.721 |
Data reduction software | iMOSFLM (7.1.0) |
Data scaling software | Aimless (0.3.11) |
Phasing software | PHASER (2.5.6) |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.910 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.078 | 0.410 |
Number of reflections | 37041 | |
<I/σ(I)> | 7.8 | 2.2 |
Completeness [%] | 98.5 | 99.4 |
Redundancy | 3.1 | 3 |
CC(1/2) | 0.996 | 0.608 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 292 | Protein at 10 mg per ml in PBS 2.4M sodium malonate pH 5.0 |