5MAN
Structure of sucrose phosphorylase from Bifidobacterium adolescentis bound to nigerose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM30A |
Synchrotron site | ESRF |
Beamline | BM30A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 82.445, 82.445, 154.864 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.573 - 2.040 |
R-factor | 0.2363 |
Rwork | 0.235 |
R-free | 0.26170 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.569 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (dev_2443) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.573 | 2.180 | |
High resolution limit [Å] | 2.040 | 5.730 | 2.040 |
Rmerge | 0.040 | 0.016 | 1.070 |
Number of reflections | 64797 | ||
<I/σ(I)> | 19.15 | 69.06 | 1.32 |
Completeness [%] | 99.8 | 99.6 | 99.8 |
Redundancy | 8 | ||
CC(1/2) | 1.000 | 1.000 | 0.492 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | PEG 1000, 150MM NACL, MES, 2%, SACHAROSE, PH 7.0 |