Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5M22

Crystal structure of hydroquinone 1,2-dioxygenase from Sphingomonas sp. TTNP3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyCCD
Collection date2016-05-12
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.8729
Spacegroup nameP 1 21 1
Unit cell lengths89.329, 126.090, 92.967
Unit cell angles90.00, 105.02, 90.00
Refinement procedure
Resolution30.000 - 2.400
R-factor0.1818
Rwork0.178
R-free0.25390
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)5m21
RMSD bond length0.012
RMSD bond angle1.545
Data reduction softwareXSCALE
Data scaling softwareXSCALE
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.50847.5082.530
High resolution limit [Å]2.3907.0902.390
Rmerge0.1070.0330.526
Number of reflections76541
<I/σ(I)>6.8319.031.62
Completeness [%]97.093.995.5
Redundancy1.97
CC(1/2)0.9870.9960.660
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.529614% PEG 3350, 0.35 M MgCl2 and 0.1 M Mes

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon