5LYN
Structure of the Tpr Domain of Sgt2 in complex with yeast Ssa1 peptide fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 298.15 |
Detector technology | PIXEL |
Collection date | 2016-07-10 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.92 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.490, 61.090, 55.250 |
Unit cell angles | 90.00, 108.81, 90.00 |
Refinement procedure
Resolution | 33.586 - 2.000 |
R-factor | 0.1598 |
Rwork | 0.158 |
R-free | 0.20250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vyi |
RMSD bond length | 0.006 |
RMSD bond angle | 0.680 |
Data reduction software | xia2 |
Data scaling software | Aimless (0.5.23) |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.590 | 33.590 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.084 | 0.056 | 0.392 |
Rmeas | 0.091 | ||
Rpim | 0.036 | ||
Total number of observations | 126863 | ||
Number of reflections | 19295 | ||
<I/σ(I)> | 16.4 | ||
Completeness [%] | 99.1 | 96.7 | 98 |
Redundancy | 6.6 | 5.8 | 6.4 |
CC(1/2) | 0.997 | 0.995 | 0.913 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 7.2 | 293.15 | 0.2 M Zinc Acetate, 30% PEG 3350 |