5LTE
Crystal structure of the alpha subunit of heme dependent oxidative N-demethylase (HODM)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-04-26 |
Detector | DECTRIS PILATUS3 X 2M |
Wavelength(s) | 0.917 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 79.908, 79.908, 144.712 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.820 - 1.650 |
R-factor | 0.16493 |
Rwork | 0.163 |
R-free | 0.19359 |
Structure solution method | MIR |
RMSD bond length | 0.024 |
RMSD bond angle | 2.230 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MLPHARE |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 26.820 | 1.700 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.061 | 0.783 |
Number of reflections | 53715 | |
<I/σ(I)> | 15.4 | 3.8 |
Completeness [%] | 99.9 | 100 |
Redundancy | 12.1 | 12.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | The HODM-heme subunit was crystallised at 3 mg ml-1 in 50 mM KPi, 100 mM KCl, pH 7.5. Initial crystallisation conditions were identified using the JCSG+ matrix screen (Molecular dimensions). Crystals suitable for diffraction experiments were obtained by sitting drop vapour diffusion at 277 K in 400 nL drops containing equal volumes of protein and a solution containing 30% PEG 2K MME and 0.1 M potassium thiocyanate |