5LLX
Bacteriophytochrome activated diguanylyl cyclase from Idiomarina species A28L with GTP bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-15 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.95000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.730, 78.640, 452.040 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.078 - 2.800 |
R-factor | 0.2255 |
Rwork | 0.223 |
R-free | 0.27030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PadC |
RMSD bond length | 0.009 |
RMSD bond angle | 0.797 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.078 | 2.900 | |
High resolution limit [Å] | 2.800 | 20.000 | 2.800 |
Rmerge | 0.184 | 0.025 | 2.556 |
Number of reflections | 44894 | ||
<I/σ(I)> | 7.81 | 35.34 | 0.61 |
Completeness [%] | 97.5 | 86 | 99.3 |
Redundancy | 4.37 | ||
CC(1/2) | 0.994 | 0.999 | 0.142 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 289 | 0.1 M Bis-Tris pH 5.5, 0.1 M ammonium acetate, 17 % (w/v) PEG 10,000. Soaked 5 minutes in GTP 10mM in reservoir solution. |