5LKV
Dehaloperoxidase B from Amphitrite ornata: imidazole complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-12-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.92 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.359, 67.359, 67.522 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.690 - 1.080 |
R-factor | 0.1231 |
Rwork | 0.122 |
R-free | 0.14060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ixf |
RMSD bond length | 0.014 |
RMSD bond angle | 1.633 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.15) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.690 | 1.100 |
High resolution limit [Å] | 1.080 | 1.080 |
Rmerge | 0.022 | 0.113 |
Number of reflections | 115028 | |
<I/σ(I)> | 33 | 7.6 |
Completeness [%] | 95.8 | 71 |
Redundancy | 3.6 | 2.4 |
CC(1/2) | 1.000 | 0.886 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.4 | 277 | 12 mg/ml DHP B in 20 mM Na cacodylate (pH 6.4) was mixed with a reservoir solution comprising 14-20% (w/v) PEG 4000 and 150-250 mM ammonium sulfate |