5LHH
Structure of the KDM1A/CoREST complex with the inhibitor 4-ethyl-N-[3-(methoxymethyl)-2-[[4-[[(3R)-pyrrolidin-3-yl]methoxy]phenoxy]methyl]phenyl]thieno[3,2-b]pyrrole-5-carboxamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-25 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.0000 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 120.490, 179.930, 234.440 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 71.368 - 3.050 |
R-factor | 0.1604 |
Rwork | 0.159 |
R-free | 0.18560 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2v1d |
RMSD bond length | 0.003 |
RMSD bond angle | 0.555 |
Data reduction software | XDS |
Data scaling software | xia2 |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 71.380 |
High resolution limit [Å] | 3.050 |
Rmerge | 0.079 |
Number of reflections | 45011 |
<I/σ(I)> | 12.8 |
Completeness [%] | 92.0 |
Redundancy | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 1.1-1.2 M Na/K tartrate 0.1 M ADA pH 6.0 |