Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5LBE

HIF prolyl hydroxylase 2 (PHD2/EGLN1) G294E variant in complex with Mn(II) and N-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (IOX3/FG2216)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2013-02-24
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9795
Spacegroup nameP 63
Unit cell lengths110.450, 110.450, 39.654
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution32.210 - 1.749
R-factor0.1651
Rwork0.164
R-free0.17710
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4bqx
RMSD bond length0.005
RMSD bond angle0.813
Data reduction softwareHKL-2000 (706E)
Data scaling softwareHKL-2000 (706E)
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.2101.810
High resolution limit [Å]1.7491.750
Rmerge0.0500.957
Number of reflections28119
<I/σ(I)>25.12.2
Completeness [%]100.0100
Redundancy6.56.3
CC(1/2)0.998
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52930.1 M MES pH 6.5, 2.0 M ammonium sulphate, 7% v/v dioxane, 0.002 M MnCl2

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon