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5L5M

Plexin A4 full extracellular region, domains 1 to 7 modeled, data to 8 angstrom, spacegroup P4(3)2(1)2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyCCD
Collection date2011-01-24
DetectorADSC QUANTUM 315
Wavelength(s)0.9796
Spacegroup nameP 43 21 2
Unit cell lengths271.480, 271.480, 251.250
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution72.126 - 8.000
R-factor0.3743
Rwork0.373
R-free0.39500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5l56
RMSD bond length0.019
RMSD bond angle2.473
Data reduction softwareiMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]72.126
High resolution limit [Å]8.0008.000
Rmerge0.1300.894
Number of reflections10298
<I/σ(I)>14.8
Completeness [%]99.5
Redundancy3.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8293.50.8 M ammonium sulfate, 0.4 M Dimethyl (2-hydroxyethyl) ammonium propane sulfonate (NDSB-211), 100 mM TRIS, pH 8.0

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