5L57
Crystal structure of Iso-citrate Dehydrogenase R132H in complex with a novel inhibitor (compound 13a)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-10-22 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 72.866, 72.866, 182.642 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.720 - 2.695 |
R-factor | 0.218 |
Rwork | 0.214 |
R-free | 0.25570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Inhouse |
RMSD bond length | 0.004 |
RMSD bond angle | 0.602 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.720 | 2.791 |
High resolution limit [Å] | 2.695 | 2.695 |
Rmerge | 0.072 | 0.525 |
Number of reflections | 14266 | |
<I/σ(I)> | 27.39 | 4.65 |
Completeness [%] | 100.0 | 99 |
Redundancy | 12.7 | 12.8 |
CC(1/2) | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.12M Ethylene Glycols, 0.1M Bicine pH 8.5, 50% (40% v/v PEG 500 MME, 20% w/v PEG 20K) [Morpheus A9] 200 plus 200nl drops (Mosquito) |