5KVQ
NADP+ bound structure of Irp3, a Thiazolinyl Imine Reductase from Yersinia enterocolitica
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-05-22 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.444, 148.506, 65.006 |
Unit cell angles | 90.00, 95.62, 90.00 |
Refinement procedure
Resolution | 39.740 - 1.450 |
R-factor | 0.1599 |
Rwork | 0.159 |
R-free | 0.17860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4gmg |
RMSD bond length | 0.008 |
RMSD bond angle | 1.147 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10_2155)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.740 | 1.530 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.088 | 0.850 |
Number of reflections | 136095 | |
<I/σ(I)> | 12 | 2.1 |
Completeness [%] | 98.4 | 97.5 |
Redundancy | 6.9 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 297 | 0.1 M HEPES pH 7.5, 20% PEG 8,000 |