5K8R
Structure of human clustered protocadherin gamma B3 EC1-4
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-11-19 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97918 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 128.881, 161.229, 53.659 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.350 - 2.500 |
R-factor | 0.2106 |
Rwork | 0.205 |
R-free | 0.25870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zi9 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.618 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (dev_2276) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.350 | 2.589 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.133 | 1.962 |
Number of reflections | 19844 | |
<I/σ(I)> | 10.06 | 0.98 |
Completeness [%] | 92.0 | 42 |
Redundancy | 6.8 | 6.7 |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 0.1 M HEPES pH 7 4% ethylene glycol 5% PEG500MME |