5K8G
Crystal structure of a putative peptide-binding domain of MpAFP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2016-02-12 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.97949 |
Spacegroup name | P 1 |
Unit cell lengths | 50.115, 61.065, 63.473 |
Unit cell angles | 66.25, 72.66, 67.94 |
Refinement procedure
Resolution | 47.640 - 2.000 |
R-factor | 0.1851 |
Rwork | 0.183 |
R-free | 0.22143 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SAD model |
RMSD bond length | 0.017 |
RMSD bond angle | 1.721 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0151) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.640 | 2.050 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.207 | 1.790 |
Number of reflections | 41606 | |
<I/σ(I)> | 6.4 | 0.9 |
Completeness [%] | 98.0 | 96.8 |
Redundancy | 4.4 | 4.4 |
CC(1/2) | 0.368 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 4.6 | 296 | Calcium chloride, sodium acetate, PEG400 |