5JUD
Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with uridine-diphosphate (UDP) - GpgS*UDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-02-10 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9795 |
Spacegroup name | I 41 |
Unit cell lengths | 100.240, 100.240, 125.620 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.120 - 2.590 |
R-factor | 0.196 |
Rwork | 0.195 |
R-free | 0.21650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4y6n |
RMSD bond length | 0.004 |
RMSD bond angle | 1.120 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.120 | 2.683 |
High resolution limit [Å] | 2.590 | 2.590 |
Rmerge | 0.054 | 0.783 |
Number of reflections | 19277 | |
<I/σ(I)> | 19.98 | 2.59 |
Completeness [%] | 100.0 | 99 |
Redundancy | 6.8 | 7 |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291 | 14% PEG 8,000, 0.3-0.5 M Li sulfate |