5JSC
Crystal structure of a Putative acyl-CoA dehydrogenase from Burkholderia xenovorans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-03-25 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 78.300, 73.750, 149.490 |
Unit cell angles | 90.00, 99.66, 90.00 |
Refinement procedure
Resolution | 45.004 - 1.500 |
R-factor | 0.13 |
Rwork | 0.130 |
R-free | 0.16010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5idu |
RMSD bond length | 0.005 |
RMSD bond angle | 0.798 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (dev_2386) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.540 | |
High resolution limit [Å] | 1.500 | 6.710 | 1.500 |
Rmerge | 0.060 | 0.029 | 0.528 |
Number of reflections | 266729 | ||
<I/σ(I)> | 14.98 | 38.66 | 2.19 |
Completeness [%] | 99.5 | 97.9 | 94.5 |
Redundancy | 4.5 | ||
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 290 | RigakuReagents JCSG+ screen A6: 20% PEG 1000, 200mM Li2SO4, 50mM Na2HPO4/Citric acid pH4.2; BuxeA.00027.j.B1.PS37826 at 15mg/ml + 2.5mM CoA; cryo: 15% EG + 1mM CoA in 2 steps; tray 270711a6; puck vod9-4 |