Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JRN

Crystal Structure of a Xylanase in Complex with a Monosaccharide at 2.84 Angstroem resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2015-10-25
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.98009
Spacegroup nameP 21 21 2
Unit cell lengths105.700, 36.100, 48.800
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.800 - 2.841
R-factor0.21
Rwork0.209
R-free0.22640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5jrm
RMSD bond length0.002
RMSD bond angle0.891
Data reduction softwareXDS (November 3, 2014)
Data scaling softwareAimless (0.5.25)
Phasing softwarePHASER (2.6.0)
Refinement softwarePHENIX (1.8.4_1496)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.8002.940
High resolution limit [Å]2.8402.840
Rmerge0.2520.884
Number of reflections4766
<I/σ(I)>12.963.73
Completeness [%]100.0100
Redundancy9.18.7
CC(1/2)0.989
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP52930.1 M sodium citrate pH 5, varying ammonium sulfate concentrations

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon