5JMA
Crystal structure of Mycobacterium avium SerB2 in complex with serine at catalytic (PSP) domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-12-05 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.98 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 63.968, 109.645, 134.246 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.561 - 2.030 |
R-factor | 0.2132 |
Rwork | 0.210 |
R-free | 0.25590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3p96 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.998 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.561 | 2.100 |
High resolution limit [Å] | 2.030 | 2.030 |
Number of reflections | 58573 | |
<I/σ(I)> | 11.529 | |
Completeness [%] | 99.3 | |
Redundancy | 7.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.6 | 277.15 | 25% PEG 8000, 0.1 M Magnesium acetate, 0.1 M HEPES pH 6.6, 0.1 - 0.5 M ortho phospho L- serine. |