5JM4
Crystal structure of 14-3-3zeta in complex with a cyclic peptide involving an adamantyl and a dicarboxy side chain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-26 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.91909 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 84.920, 105.740, 113.930 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.310 - 2.340 |
R-factor | 0.2004 |
Rwork | 0.198 |
R-free | 0.24360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3nkx |
RMSD bond length | 0.019 |
RMSD bond angle | 2.202 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.770 | 2.600 | |
High resolution limit [Å] | 2.340 | 40.000 | 2.340 |
Rmerge | 0.099 | 0.028 | 0.784 |
Rmeas | 0.108 | 0.032 | 0.852 |
Total number of observations | 286758 | ||
Number of reflections | 44013 | 5 | 11766 |
<I/σ(I)> | 12.52 | 24.43 | 2.78 |
Completeness [%] | 99.9 | 31.2 | 100 |
Redundancy | 6.52 | ||
CC(1/2) | 0.999 | 0.998 | 0.598 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277.15 | 0.09 M HEPES sodium salt pH 7.5; 1.26 M tri-Sodium citrate; 10 %(v/v) Glycerol |