5JK2
Crystal structure of Treponema pallidum Tp0751 (Pallilysin)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-19 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.984 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 144.720, 144.720, 152.610 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 65.383 - 2.150 |
R-factor | 0.2465 |
Rwork | 0.239 |
R-free | 0.27640 |
Structure solution method | SAD |
RMSD bond length | 0.003 |
RMSD bond angle | 0.642 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.360 | 2.190 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.122 | 0.719 |
Number of reflections | 100394 | |
<I/σ(I)> | 10.7 | 2.7 |
Completeness [%] | 99.9 | 100 |
Redundancy | 7.5 | 7.4 |
CC(1/2) | 0.993 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.4 | 291 | 0.1 M sodium acetate pH 5.4, 1.6 M sodium formate |