5JFQ
Geranylgeranyl Pyrophosphate Synthetase from archaeon Geoglobus acetivorans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-15 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.0 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 85.860, 85.860, 188.160 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 78.112 - 2.510 |
R-factor | 0.2077 |
Rwork | 0.205 |
R-free | 0.25880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1wy0 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.009 |
Data reduction software | MOSFLM |
Phasing software | BALBES |
Refinement software | PHENIX ((dev_2405: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 94.080 | 2.620 |
High resolution limit [Å] | 2.510 | 2.510 |
Rmerge | 0.309 | |
Number of reflections | 24891 | |
<I/σ(I)> | 6.7 | |
Completeness [%] | 99.8 | 99.7 |
Redundancy | 19.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 310 | 0.1M Tris pH 8.0, 0.1M sodium malonate pH 8.0, 33% PEG 1000 and 10% ethylene glycol mixed with protein in ratio 1:1 over 500 ml of precipitant solution covered with oils |