5JE5
Crystal structure of Burkholderia glumae ToxA with bound S-adenosylhomocysteine (SAH) and 1-demethyltoxoflavin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE A1 |
Synchrotron site | CHESS |
Beamline | A1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-20 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.97670 |
Spacegroup name | P 32 |
Unit cell lengths | 45.539, 45.539, 96.225 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 18.567 - 1.564 |
R-factor | 0.1456 |
Rwork | 0.144 |
R-free | 0.16990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Burkholderia glumae ToxA with bound SAH and 1 6-didemethyltoxoflavin |
RMSD bond length | 0.009 |
RMSD bond angle | 1.097 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10-2155-000)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 18.600 | 1.620 |
High resolution limit [Å] | 1.560 | 1.560 |
Rmerge | 0.036 | 0.169 |
Number of reflections | 31081 | |
<I/σ(I)> | 22 | 5.5 |
Completeness [%] | 97.9 | 89.2 |
Redundancy | 2.4 | 1.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 18 - 23% polyethylene glycol monomethyl ether 2000, 100 mM Tris, pH 6.1 - 6.8, 6 mM SAH, and 2 mM 1-demethyltoxoflavin |