5JDH
Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with 10 mM Na+ and 10mM Ca2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-03-21 |
Detector | MARRESEARCH |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.883, 72.218, 96.099 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.208 - 2.203 |
R-factor | 0.1962 |
Rwork | 0.193 |
R-free | 0.23690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3v5u |
RMSD bond length | 0.004 |
RMSD bond angle | 0.650 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.240 |
High resolution limit [Å] | 2.200 | 5.970 | 2.200 |
Rmerge | 0.103 | 0.028 | |
Number of reflections | 18126 | ||
<I/σ(I)> | 7.3 | ||
Completeness [%] | 99.7 | 98.8 | 100 |
Redundancy | 7.1 | 6.4 | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 293 | PEG400 |