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5JAF

LeuT Na+-free Return State, C2 form at pH 5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2014-01-26
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameC 1 2 1
Unit cell lengths88.450, 96.080, 84.180
Unit cell angles90.00, 97.37, 90.00
Refinement procedure
Resolution36.926 - 3.021
R-factor0.2013
Rwork0.196
R-free0.25200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3f3a
RMSD bond length0.004
RMSD bond angle0.584
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX ((dev_2283: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]37.0003.160
High resolution limit [Å]3.0203.020
Rmerge0.1041.462
Number of reflections10033
<I/σ(I)>9.2
Completeness [%]99.699.7
Redundancy2.50.2
CC(1/2)0.998
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP52921 uL + 1uL drop with 500 uL reservoir solution: 100 mM Tris-MES pH 5.0, 100 mM KCl, 20-24% w/w PEG550 MME and 10% (v/v) glycerol; protein buffer: 10 mM Tris-MES pH 6.0, 100 mM KCl, 10% (v/v) glycerol, 40 mM n-octyl-beta-D-glucoside

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PDB entries from 2024-05-15

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