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5J7P

Macrophage Migration Inhibitory Factor bound to Covalent Inhibitor RDR03785

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyCCD
Collection date2015-05-04
DetectorRIGAKU SATURN 944+
Wavelength(s)1.5418
Spacegroup nameP 31 2 1
Unit cell lengths95.629, 95.629, 103.497
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution82.820 - 1.850
R-factor0.18
Rwork0.178
R-free0.20080
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3u18
RMSD bond length0.008
RMSD bond angle1.433
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]82.82050.0001.880
High resolution limit [Å]1.8505.0201.850
Rmerge0.0890.0430.741
Rmeas0.0950.0450.839
Rpim0.0330.0140.390
Total number of observations368234
Number of reflections47180
<I/σ(I)>11.5
Completeness [%]100.099.4100
Redundancy7.8104.5
CC(1/2)0.9990.705
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7293.152.2 M Ammonium Sulfate, 3% isopropanol and 0.1 M Tris pH 7.0

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PDB entries from 2024-05-15

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