5J46
Crystal structure of a Peptide Deformylase from Burkholderia multivorans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-03-17 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97857 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 41.720, 69.070, 119.870 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.923 - 1.950 |
R-factor | 0.1769 |
Rwork | 0.173 |
R-free | 0.20680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2w3t |
RMSD bond length | 0.007 |
RMSD bond angle | 0.841 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.000 | |
High resolution limit [Å] | 1.950 | 8.720 | 1.950 |
Rmerge | 0.066 | 0.037 | 0.497 |
Number of reflections | 12954 | ||
<I/σ(I)> | 16.64 | 30.8 | 3.56 |
Completeness [%] | 99.4 | 95.4 | 100 |
Redundancy | 6.7 | 6.9 | |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 290 | BumuA.00078.a.B1.PS37840 at 14mg/ml, mixed 1:1 with MCSG1(b5), 0.2M MgCl2, 0.1M Tris HCl pH 8.5, 25% (w/v) PEG 3350, cryo protected with 20% EG in 2 steps |