5J1N
Lassa virus L protein cap-snatching endonuclease. Bound to one manganese ion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-11-21 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.976 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 51.500, 51.500, 143.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.450 - 1.090 |
R-factor | 0.16178 |
Rwork | 0.161 |
R-free | 0.17931 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5izh |
RMSD bond length | 0.010 |
RMSD bond angle | 1.498 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.450 | 1.120 |
High resolution limit [Å] | 1.090 | 1.090 |
Rmerge | 0.061 | 0.705 |
Number of reflections | 80592 | |
<I/σ(I)> | 16.93 | |
Completeness [%] | 99.2 | |
Redundancy | 6.72 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 294 | 0.1 MES pH6 20% 2 Methyl-2,4,pentanediol 2mM MnCl2 10 mM GMP |