5J0E
Crystal structures of Pribnow box consensus promoter sequence (P32)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-X |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-03-01 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.5417 |
Spacegroup name | P 32 |
Unit cell lengths | 46.906, 46.906, 99.044 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.620 - 2.810 |
R-factor | 0.22707 |
Rwork | 0.226 |
R-free | 0.24801 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 463d |
RMSD bond length | 0.010 |
RMSD bond angle | 1.787 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.620 | 2.910 |
High resolution limit [Å] | 2.810 | 2.810 |
Rmerge | 0.028 | 0.136 |
Number of reflections | 5955 | |
<I/σ(I)> | 17.08 | 3.87 |
Completeness [%] | 99.3 | 96.5 |
Redundancy | 1.98 | 1.91 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | MPD, sodium cacodylate, zinc chloride, spermine |