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5J0B

Structure of the immune receptor CD33 in complex with 6'-sialyllactose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-05-08
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.920
Spacegroup nameP 21 21 21
Unit cell lengths64.490, 123.680, 141.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.570 - 2.480
R-factor0.2305
Rwork0.229
R-free0.25130
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ihb
RMSD bond length0.003
RMSD bond angle0.586
Data reduction softwarexia2
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((dev_2313: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.5702.569
High resolution limit [Å]2.4802.480
Rmerge0.0990.926
Number of reflections39754
<I/σ(I)>8.051.28
Completeness [%]97.298
Redundancy3.94.1
CC(1/2)0.989
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5295.152% PEG 20,000, 4% PEG MME 500, 100 MM BICINE/TRIS BASE PH 8.5, 1XMORPHEUS AMINO ACIDS. CRYSTALS SOAKED IN 20 MM 6'-SIALYLLACTOSE IN MOTHER LIQUOR FOR 10 DAYS.

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