5IYP
Protruding domain of GII.4 human norovirus CHDC2094 in complex with HBGA type A (triglycan)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID23-1 |
| Synchrotron site | ESRF |
| Beamline | ID23-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2015-07-27 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.97625 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 89.710, 106.120, 135.920 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.248 - 1.270 |
| R-factor | 0.1361 |
| Rwork | 0.135 |
| R-free | 0.15940 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5iyn |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.246 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER (2.5.6) |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 48.250 | 1.280 | |
| High resolution limit [Å] | 1.250 | 5.590 | 1.250 |
| Rmerge | 0.057 | 0.026 | 0.687 |
| Number of reflections | 175960 | ||
| <I/σ(I)> | 12.8 | 48.26 | 1.69 |
| Completeness [%] | 98.8 | 98.1 | 97.1 |
| Redundancy | 3.9 | ||
| CC(1/2) | 0.999 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 291 | Sodium citrate, PEG3350 |






