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5IYG

Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyCCD
Collection date2013-07-01
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.976
Spacegroup nameP 41 21 2
Unit cell lengths41.463, 41.463, 88.724
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution27.838 - 1.701
R-factor0.2175
Rwork0.214
R-free0.25080
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3v9d
RMSD bond length0.019
RMSD bond angle2.036
Phasing softwarePHASER (2.5.5)
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]27.83827.8381.800
High resolution limit [Å]1.7005.0301.700
Rmerge0.0420.0330.319
Rmeas0.0430.0340.326
Total number of observations241845
Number of reflections90123721430
<I/σ(I)>43.0478.6511.42
Completeness [%]99.388.899.3
CC(1/2)1.0000.9990.993
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72931mM DNA, 50mM sodium cacodylate buffer, 5mM Mgcl2, 5mM spermine, 33% MPD.

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