5IYG
Comparison of X-ray crystal structures of a tetradecamer sequence d(CCCGGGTACCCGGG)2 at 1.7 resolution
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE BM14 |
| Synchrotron site | ESRF |
| Beamline | BM14 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-07-01 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.976 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 41.463, 41.463, 88.724 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 27.838 - 1.701 |
| R-factor | 0.2175 |
| Rwork | 0.214 |
| R-free | 0.25080 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3v9d |
| RMSD bond length | 0.019 |
| RMSD bond angle | 2.036 |
| Phasing software | PHASER (2.5.5) |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 27.838 | 27.838 | 1.800 |
| High resolution limit [Å] | 1.700 | 5.030 | 1.700 |
| Rmerge | 0.042 | 0.033 | 0.319 |
| Rmeas | 0.043 | 0.034 | 0.326 |
| Total number of observations | 241845 | ||
| Number of reflections | 9012 | 372 | 1430 |
| <I/σ(I)> | 43.04 | 78.65 | 11.42 |
| Completeness [%] | 99.3 | 88.8 | 99.3 |
| CC(1/2) | 1.000 | 0.999 | 0.993 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 1mM DNA, 50mM sodium cacodylate buffer, 5mM Mgcl2, 5mM spermine, 33% MPD. |






