5IQ9
Crystal structure of 10E8v4 Fab in complex with an HIV-1 gp41 peptide.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2014-08-15 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 65.025, 79.529, 211.367 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.448 - 2.400 |
R-factor | 0.1928 |
Rwork | 0.191 |
R-free | 0.23600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4g6f |
RMSD bond length | 0.003 |
RMSD bond angle | 0.535 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.490 |
High resolution limit [Å] | 2.400 | 5.170 | 2.400 |
Rmerge | 0.103 | 0.058 | 0.462 |
Rmeas | 0.127 | ||
Rpim | 0.073 | ||
Total number of observations | 101101 | ||
Number of reflections | 39438 | ||
<I/σ(I)> | 6.5 | ||
Completeness [%] | 87.3 | 75.7 | 91.1 |
Redundancy | 2.6 | 2.8 | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 15% PEG3350, 25% Isopropanol, 0.1M Tris-HCl, 8.5, 10% Jeffamine. |