5IO8
Salmonella Typhimurium VirG-like (STV) protein at 2.19 Angstrom resolution solved by Iodine SAD.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-13 |
Detector | MAR CCD 225 |
Wavelength(s) | 1.771 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 60.115, 60.277, 62.603 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.302 - 2.192 |
R-factor | 0.2085 |
Rwork | 0.204 |
R-free | 0.24540 |
Structure solution method | SAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.193 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.230 |
High resolution limit [Å] | 2.190 | 5.940 | 2.190 |
Rmerge | 0.058 | 0.038 | 0.403 |
Number of reflections | 22529 | ||
<I/σ(I)> | 13.2 | ||
Completeness [%] | 99.8 | 99.6 | 99 |
Redundancy | 7.5 | 7.7 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 1.8 M Sodium phosphate monobasic monohydrate, potassium phosphate dibasic. pH=4.6-5.2. Crystal was soaked in 100mM Sodium Iodide for 5 minutes before flash freezing. |