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5IM7

Crystal structure of HLA-B5801, a protective HLA allele for HIV-1 infection

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-07-17
DetectorADSC QUANTUM 315r
Wavelength(s)0.9793
Spacegroup nameP 21 21 21
Unit cell lengths69.439, 81.956, 157.123
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.814 - 2.502
R-factor0.1951
Rwork0.193
R-free0.23320
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1a1m
RMSD bond length0.010
RMSD bond angle1.246
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]2.500
Rmerge0.102
Number of reflections31596
<I/σ(I)>12.12
Completeness [%]99.8
Redundancy7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52910.1M MES pH 6.5, 15% PEG4K, 20% 2-proponal

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