5IIY
SrpA adhesin in complex with the Neu5Ac-galactoside disaccharide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2015-12-18 |
Detector | MARRESEARCH |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 174.522, 46.769, 64.761 |
Unit cell angles | 90.00, 102.72, 90.00 |
Refinement procedure
Resolution | 45.098 - 1.888 |
R-factor | 0.1779 |
Rwork | 0.177 |
R-free | 0.20100 |
RMSD bond length | 0.018 |
RMSD bond angle | 0.893 |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 10.000 | 1.660 |
High resolution limit [Å] | 1.600 | 3.450 | 1.600 |
Rmerge | 0.072 | 0.036 | 0.823 |
<I/σ(I)> | 10.6 | ||
Completeness [%] | 98.8 | 99.6 | 95.6 |
Redundancy | 7.2 | 7.4 | 6.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.2 M CalciumAcetate 0.1 M Na Cacodylate, pH 6.5 18% PEG 8000 |