5IIK
Crystal structure of the post-catalytic nick complex of DNA polymerase lambda with a templating 8-oxo-dG and incorporated dC
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X6A |
Synchrotron site | NSLS |
Beamline | X6A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-08-12 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 56.182, 63.475, 140.369 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.070 - 1.982 |
R-factor | 0.1939 |
Rwork | 0.192 |
R-free | 0.23780 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.002 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 57.840 |
High resolution limit [Å] | 1.980 |
Number of reflections | 32242 |
<I/σ(I)> | 31.2 |
Completeness [%] | 92.3 |
Redundancy | 7.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 278 | 0.2 M ammonium acetate, 0.1 M sodium citrate pH 4.8, and 2-7% PEG 4000 |