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5I8Y

Structure of Mouse Acireductone Dioxygenase bound to Co2+ and 2-keto-4-(methylthio)-butyric acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2014-08-19
DetectorADSC QUANTUM 315
Wavelength(s)0.9790
Spacegroup nameP 41 21 2
Unit cell lengths79.089, 79.089, 115.125
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.111 - 1.942
R-factor0.1617
Rwork0.159
R-free0.19110
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1vr3
RMSD bond length0.007
RMSD bond angle0.988
Data scaling softwareSCALEPACK (v705b)
Phasing softwarePHASER (v1.9)
Refinement softwarePHENIX (v1.9)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.010
High resolution limit [Å]1.9404.1801.940
Rmerge0.0800.0560.423
Rmeas0.082
Rpim0.016
Total number of observations712406
Number of reflections27705
<I/σ(I)>12.7
Completeness [%]100.099.7100
Redundancy25.724.124.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.62775.0% Glycerol, 19.0% iso-Propanol, 19.0% PEG-4000, 0.1M Citrate pH 5.6

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