5I4M
Crystal structure of Amidase, hydantoinase/carbamoylase family from Burkholderia vietnamiensis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-12-10 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.460, 124.230, 77.040 |
Unit cell angles | 90.00, 101.94, 90.00 |
Refinement procedure
Resolution | 47.935 - 1.800 |
R-factor | 0.1393 |
Rwork | 0.139 |
R-free | 0.17120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wjb |
RMSD bond length | 0.005 |
RMSD bond angle | 0.812 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (dev_2313) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.935 | 50.000 | 1.850 |
High resolution limit [Å] | 1.800 | 8.050 | 1.800 |
Rmerge | 0.092 | 0.029 | 0.516 |
Number of reflections | 80654 | ||
<I/σ(I)> | 12.33 | 34.63 | 2.59 |
Completeness [%] | 99.9 | 98.7 | 99.9 |
Redundancy | 3.8 | ||
CC(1/2) | 0.996 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 290 | MCSG1 screen B10: 24% PEG 4000, 20% glycerol, 160mM MgCl2, 100mM Tris/HCl pH 8.5; BuviA.12245.b.B2.PS02523 at 18.3 mg/ml, + 3mM Alanine; cryo: direct; tray 267436b10, puck LWQ9-7 |