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5HQJ

Crystal structure of ABC transporter Solute Binding Protein B1G1H7 from Burkholderia graminis C4D1M, target EFI-511179, in complex with D-arabinose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-10-20
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameP 1 21 1
Unit cell lengths61.094, 37.403, 62.429
Unit cell angles90.00, 113.61, 90.00
Refinement procedure
Resolution27.991 - 1.550
R-factor0.2081
Rwork0.206
R-free0.25400
Structure solution methodSAD
RMSD bond length0.012
RMSD bond angle1.355
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareMLPHARE
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.610
High resolution limit [Å]1.5503.3401.550
Rmerge0.0570.0330.656
Rmeas0.0610.0350.705
Rpim0.0220.0130.258
Total number of observations282195
Number of reflections37889
<I/σ(I)>10.3
Completeness [%]99.998.7100
Redundancy7.47.27.4
CC(1/2)0.9980.910
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5298Protein (10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-Arabinose); Reservoir (MCSG2 B2)(0.2 M Potassium Acetate 20 %(w/v) PEG 3350); Cryoprotection (20% Ethylene Glycol, 80% Reservoir)

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PDB entries from 2024-05-15

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