5HMA
Crystal structure of MamO protease domain from Magnetospirillum magneticum (Ni bound form)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-13 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.116 |
Spacegroup name | P 4 3 2 |
Unit cell lengths | 129.163, 129.163, 129.163 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.666 - 2.299 |
R-factor | 0.1852 |
Rwork | 0.184 |
R-free | 0.20870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5MH9 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.090 |
Data reduction software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 6.240 | 2.300 |
Rmerge | 0.085 | 0.037 | 0.897 |
Rmeas | 0.089 | 0.039 | 0.933 |
Rpim | 0.025 | 0.011 | 0.256 |
Total number of observations | 214349 | ||
Number of reflections | 16999 | ||
<I/σ(I)> | 12.3 | ||
Completeness [%] | 99.9 | 99.3 | 100 |
Redundancy | 12.6 | 11.2 | 13.1 |
CC(1/2) | 0.999 | 0.858 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 291 | 50mM Na Acetate pH 4.6, 3.6M NH4Cl, 5% glycerol |