5HM2
Crystal structure of the 3C protease from South African Territories type 2 foot-and-mouth disease virus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-12-09 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.8726 |
Spacegroup name | P 32 |
Unit cell lengths | 53.980, 53.980, 318.531 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.748 - 3.200 |
R-factor | 0.2247 |
Rwork | 0.222 |
R-free | 0.27230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2j92 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.079 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.100 | 3.370 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.116 | 0.420 |
Number of reflections | 17053 | |
<I/σ(I)> | 5.7 | 1.7 |
Completeness [%] | 99.3 | 99.5 |
Redundancy | 2.7 | 2.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 15% (w/v) PEG-8000, 0.09 M Na-cacodylate pH 7.0, 0.27 M Ca-acetate, 0.01 M Tris pH 8.5, 0.08 M Na-thiocyanate |