5HKV
The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-04-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.971 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 280.885, 280.885, 873.522 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 3.660 |
R-factor | 0.1896 |
Rwork | 0.187 |
R-free | 0.23400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wce |
RMSD bond length | 0.009 |
RMSD bond angle | 1.438 |
Data reduction software | HKL-2000 |
Data scaling software | XSCALE |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | |
High resolution limit [Å] | 3.640 | |
Rmerge | 0.237 | 0.972 |
Number of reflections | 223602 | |
<I/σ(I)> | 9.08 | 1.37 |
Completeness [%] | 98.0 | 78.1 |
Redundancy | 10 | 4.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 1:2 MPD: EtOH, Hepes pH=7.6 10mM, Mg2Cl 10mM, KCl 60mM, NH4Cl 15mM |