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5HFE

The third PDZ domain from the synaptic protein PSD-95 (G330T, H372A double mutant) in complex with a C-terminal peptide derived from CRIPT

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2012-10-22
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54178
Spacegroup nameP 41 3 2
Unit cell lengths89.751, 89.751, 89.751
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.138 - 1.800
R-factor0.179
Rwork0.175
R-free0.21080
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1be9
RMSD bond length0.014
RMSD bond angle1.414
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (dev_2026)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.1381.872
High resolution limit [Å]1.8001.800
Rmerge0.0610.594
Number of reflections11944
<I/σ(I)>50.5391.815
Completeness [%]99.5
Redundancy18.13.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7289Peptide was included in protein buffer to a final molar ratio of 2:1 relative to protein. Reservoir solution contained 1.25 M sodium citrate, pH 7.0. Equal amounts (1.5 microliters) of protein (9 mg/mL) and reservoir solution were mixed and equillibrated against 500 microliters of crystallization buffer.

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