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5HED

The third PDZ domain from the synaptic protein PSD-95 in complex with a mutant C-terminal peptide derived from CRIPT (T-2F)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2012-09-12
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54178
Spacegroup nameP 41 3 2
Unit cell lengths89.551, 89.551, 89.551
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.559 - 1.700
R-factor0.1728
Rwork0.170
R-free0.19730
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1be9
RMSD bond length0.014
RMSD bond angle1.460
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (dev_2026)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.5591.760
High resolution limit [Å]1.7001.700
Rmerge0.0310.302
Number of reflections13974
<I/σ(I)>60.0172.627
Completeness [%]99.3
Redundancy9.23
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.1289Peptide was included in protein buffer to a final molar ratio of 2:1 relative to protein. Reservoir solution contained 1.125 M sodium citrate, pH 7.1. Equal amounts (1.5 microliters) of protein (9 mg/mL) and reservoir solution were mixed and equillibrated against 500 microliters of crystallization buffer.

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