5HAA
Crystal structure of mpy-RNase J, an archaeal RNase J from Methanolobus psychrophilus R15
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-01-23 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.97853 |
Spacegroup name | P 62 2 2 |
Unit cell lengths | 162.508, 162.508, 180.659 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.033 - 2.904 |
R-factor | 0.2399 |
Rwork | 0.237 |
R-free | 0.27370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3zq4 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.305 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (dev_1980) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.000 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.098 | 1.000 |
Number of reflections | 31664 | |
<I/σ(I)> | 38.3 | 2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 39 | 41.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 285 | The crystal was grown in the solution containing 2M (NH4)2SO4 and 2%-5% glycerol. |