5H9D
Crystal structure of Heptaprenyl Diphosphate Synthase from Staphylococcus aureus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-09 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 137.394, 137.642, 144.050 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 - 2.680 |
Rwork | 0.243 |
R-free | 0.28670 |
Structure solution method | MOLECULAR REPLACEMENT |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | CNS (1.21) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.000 | 25.000 | 2.780 |
High resolution limit [Å] | 2.680 | 5.751 | 2.680 |
Rmerge | 0.052 | 0.027 | 0.480 |
Rmeas | 0.057 | 0.031 | 0.534 |
Rpim | 0.025 | 0.013 | 0.229 |
Total number of observations | 175144 | ||
Number of reflections | 35313 | ||
<I/σ(I)> | 25 | ||
Completeness [%] | 92.0 | 85.4 | 94.3 |
Redundancy | 5 | 4.7 | 5 |
CC(1/2) | 0.999 | 0.878 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 298 | Citic acid, bis-tris propane, PEG 3350 |