5H03
Crystal structure of an ADP-ribosylating toxin BECa from C. perfringens
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-06-05 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 69.847, 94.002, 121.059 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.123 - 1.890 |
R-factor | 0.2123 |
Rwork | 0.209 |
R-free | 0.25770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gir |
RMSD bond length | 0.009 |
RMSD bond angle | 1.039 |
Data reduction software | CrystalClear |
Data scaling software | d*TREK (8.0SSI) |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.120 | 37.120 | 1.960 |
High resolution limit [Å] | 1.890 | 4.070 | 1.890 |
Rmerge | 0.095 | 0.039 | 0.426 |
Number of reflections | 31752 | ||
<I/σ(I)> | 13 | 39.9 | 4.2 |
Completeness [%] | 98.4 | 98.2 | 88.1 |
Redundancy | 9.54 | 9.88 | 6.08 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.8 | 293 | 100 mM Tris-HC, 450 mM magunesium chloride, 23% PEG4000 |